Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950823.1_cds_XP_016491111.1_81463
CDS Infomation

[gene=LOC107810796] [db_xref=GeneID:107810796] [protein=zinc finger CCCH domain-containing protein 49-like] [protein_id=XP_016491111.1] [location=complement(join(16329..17160,18453..18676,19390..19659,21194..21298))] [gbkey=CDS]
Sequence

ATGGCGCATAGGTTGCTGAGAGATGCAGAAGCTGATGGATGGGAACGATCTGATTTCCCT
ATTATATGCGAGTCGTGTCTTGGCGACAGTCCTTACGTGCGGATGACAAAAGCAGACTAT
GACAAGGAGTGCAAGATCTGCACACGACCCTTCACAGTGTTTAGATGGAGGCCTGGTCGG
GATGCAAGATACAAAAAGACTGAGATCTGTCAGACCTGCAGCAAATTGAAGAATGTTTGT
CAAGTTTGCCTATTGGATCTTGAATATGGTTTGCCAGTTCAGGTCCGAGACACTGCTCTC
AGTATCAACTCGAATGATGCCATCCCGAAGAGTGACGTAAATAGAGAATATTTTGCAGAG
GAACATGACCGCAGGGCAAGAGCTGGTATTGATTATGAATCTTCATATGGGAAAGTCCGT
CCAAATGACACTATCATGAAGCTTCAAAGAACAAGTCCATACTACAAGAGAAATCGGGCA
CATGTTTGCAGTTTCTATATACGTGGTCAATGTACAAGAGGTCTGGAGTGTCCTTACAGG
CATGAGATGCCTGAGACAGGAGAATTGTCACAGCAAAATATTAAAGACCGTTACTATGGA
GTCAATGATCCAGTGGCTTTAAAGCTACTGAATAAAGCAGGTGAAATGCCTACATTGGAG
GCCCCTGATGATGAGAGCATTAGAACCCTCTATGTCGGTGGTGTTGATGCAAGAATCACC
GAACAGGACCTTAGGGACCACTTTTATGCACATGGTGAAATTGAGTCCATCAAAATGGTG
GTCCAACGTGGTTGTGCTTTCGTAACTTACACAACCAGAGAAGGTGCAGAGAAGGCAGCT
GAGGAACTAGCAAACAAGCTGGTGATAAAGGGCCTGAGACTGAAGCTACTCTGGGGGAGA
CCTCAAGCACCCAAGCCAGAGTCTGAGGTCCCCGATGAAGCAAGGCAGCAGGCTGCTGTG
ACTCACAGTGGATTGTTGCCTAGGGCAGTCATATCACAGCAGCAAAATCAGCCATTTCAG
CCACCAGGAACTCAGGACCAACCCCCATCCATGCCTTACTTCAACATACCCCCGATGCCT
CAGCAAGACAGACCATATTATCCATCAATGGATCCACAAAGGATGGGTGCCCTAGTTCAA
TCCCAGGAGGGGGCTTCTAGTTCAGCTACTGGGTCCGGTCCCGGTGAAAATAGGAGTGGT
TCTGAGAATCAACAAGGACAACGTTATGCATATCCACCTGGGGCACCACCTCAAGTTCAA
TTTTATCCGCCTTATTATCCACCCTATGGGTATACGCCACCACCTCCTCCACCTTATCAA
CAGTATCCTCCTCAACCTTATCAAGCTACAGCACCCCCACCACCTGGTGGTCAGCAATCT
GCACATCTGCAGCTGCCTCAGTCGGCGGCAGCAGCCGCACAACAGCCTTAA

Peptide Sequence

PEP ID

XP_016491111.1
PEP Infomation

PREDICTED: zinc finger CCCH domain-containing protein 49-like [Nicotiana tabacum]
Sequence

MAHRLLRDAEADGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR
DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE
EHDRRARAGIDYESSYGKVRPNDTIMKLQRTSPYYKRNRAHVCSFYIRGQCTRGLECPYR
HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPTLEAPDDESIRTLYVGGVDARIT
EQDLRDHFYAHGEIESIKMVVQRGCAFVTYTTREGAEKAAEELANKLVIKGLRLKLLWGR
PQAPKPESEVPDEARQQAAVTHSGLLPRAVISQQQNQPFQPPGTQDQPPSMPYFNIPPMP
QQDRPYYPSMDPQRMGALVQSQEGASSSATGSGPGENRSGSENQQGQRYAYPPGAPPQVQ
FYPPYYPPYGYTPPPPPPYQQYPPQPYQATAPPPPGGQQSAHLQLPQSAAAAAQQP

Transcript Sequence

Gene sequence data has not been registered.